# Mdexa database

Mdexa is data infrastructure for medical AI. It is a database of biomedical datasets across modern medicine and traditional medicine systems, including Traditional Chinese Medicine. For each dataset it records the license verdict, the source risks, the quoted source text behind them and the date last verified. Agents can call it directly through an MCP server or an HTTP API to search datasets by domain, task, language and license, to check a whole list of datasets at once, and to retrieve citable evidence. Browsing and light use need no account; a free account adds self-service API keys, higher limits and a usage console.


101 datasets · last verified 2026-11-14 · every record: https://mdexa.com/catalog.json

## Datasets

- [BindingDB](https://mdexa.com/datasets/bindingdb/) — Permissive · Link only · derived · 2026-11-14
- [ChEMBL](https://mdexa.com/datasets/chembl/) — Permissive · Link only · 2026-11-14
- [UniProt](https://mdexa.com/datasets/uniprot/) — Permissive · Link only · 2026-11-13
- [医学考试题库 JSON 数据集](https://mdexa.com/datasets/medical-exam-question-bank-json/) — Permissive · Link only · exam-derived · 2026-11-14
- [Chinese Herbal Medicine Sentiment Analysis Dataset](https://mdexa.com/datasets/chinese-herbal-medicine-sentiment/) — Permissive · Link only · scraped · 2026-11-14
- [AlphaFold Protein Structure Database](https://mdexa.com/datasets/alphafold-db/) — Permissive · Link only · derived, model-generated · 2026-11-14
- [LingLanMedBench Traditional Chinese Medicine Benchmark Dataset](https://mdexa.com/datasets/linglan/) — Permissive · Link only · exam-derived · 2026-11-14
- [EgoExOR: An Egocentric–Exocentric Operating Room Dataset for Comprehensive Understanding of Surgical Activities](https://mdexa.com/datasets/egoexor/) — Permissive · Link only · 2026-11-14
- [Traditional Chinese Medicine Examination](https://mdexa.com/datasets/tcmle/) — Permissive · Link only · exam-derived · 2026-11-14
- [GBaker/MedQA-USMLE-4-options-hf](https://mdexa.com/datasets/medqa-usmle-4-options-hf/) — Permissive · Link only · exam-derived · 2026-11-14
- [HWTCM（Haiwei 中医评测集）](https://mdexa.com/datasets/hwtcm/) — Permissive · Link only · unknown-provenance · 2026-11-12
- [HealthBench](https://mdexa.com/datasets/healthbench/) — Permissive · Link only · 2026-11-14
- [TCM-Ladder](https://mdexa.com/datasets/tcm-ladder/) — Permissive · Link only · exam-derived, scraped · 2026-11-12
- [Huatuo_knowledge_graph_qa](https://mdexa.com/datasets/huatuo-knowledge-graph-qa/) — Permissive · Link only · 2026-11-14
- [TCM-Text-Exams（ShizhenGPT 文本评测）](https://mdexa.com/datasets/tcm-text-exams/) — Permissive · Link only · exam-derived · 2026-11-12
- [huatuo26M-testdatasets](https://mdexa.com/datasets/huatuo26m-testdatasets/) — Permissive · Link only · derived, real-patient-text · 2026-11-14
- [TCM-Vision-Benchmark](https://mdexa.com/datasets/tcm-vision-benchmark/) — Permissive · Link only · unknown-provenance · 2026-11-12
- [HuatuoGPT2-Pretraining-Instruction](https://mdexa.com/datasets/huatuogpt2-pretraining-instruction/) — Permissive · Link only · model-generated · 2026-11-14
- [HuatuoGPT2-SFT-GPT4-140K](https://mdexa.com/datasets/huatuogpt2-sft-gpt4-140k/) — Permissive · Link only · derived, model-generated · 2026-11-14
- [INCLUDE](https://mdexa.com/datasets/include-base-44/) — Permissive · Link only · exam-derived · 2026-11-14
- [Medical-Reasoning-SFT-Mega](https://mdexa.com/datasets/medical-reasoning-sft-mega/) — Permissive · Link only · model-generated · 2026-11-14
- [MedMCQA](https://mdexa.com/datasets/medmcqa/) — Permissive · Link only · exam-derived, scraped · 2026-11-14
- [medmcqa-es](https://mdexa.com/datasets/medmcqa-es/) — Permissive · Link only · 2026-11-14
- [MedQA (USMLE 4-option, US subset + English textbook corpus)](https://mdexa.com/datasets/medqa-2/) — Permissive · Link only · derived, exam-derived · 2026-11-14
- [MedQA-USMLE-4-options](https://mdexa.com/datasets/medqa-usmle-4-options/) — Permissive · Link only · exam-derived · 2026-11-14
- [PubChem](https://mdexa.com/datasets/pubchem/) — Permissive · Link only · 2026-11-14
- [PubMedCausal](https://mdexa.com/datasets/pubmedcausal/) — Permissive · Link only · 2026-11-14
- [PubMedQA](https://mdexa.com/datasets/pubmedqa/) — Permissive · Link only · 2026-11-14
- [R2MED Benchmark](https://mdexa.com/datasets/medqa-diag/) — Permissive · Link only · 2026-11-14
- [RCSB Protein Data Bank](https://mdexa.com/datasets/rcsb-pdb/) — Permissive · Link only · 2026-11-14
- [Reactome](https://mdexa.com/datasets/reactome/) — Permissive · Link only · 2026-11-14
- [STRING](https://mdexa.com/datasets/string/) — Permissive · Link only · 2026-11-14
- [tmmlu++](https://mdexa.com/datasets/tmmluplus/) — Permissive · Link only · 2026-11-14
- [TopU-LBVS: Multi-Target Benchmark for Ligand-Based Virtual Screening](https://mdexa.com/datasets/topu-lbvs/) — Permissive · Link only · derived · 2026-11-14
- [Traditional-Chinese-Medicine-Dataset-Pretrain](https://mdexa.com/datasets/traditional-chinese-medicine-dataset-pretrain/) — Permissive · Link only · real-patient-text, scraped · 2026-11-14
- [gnomAD](https://mdexa.com/datasets/gnomad/) — Permissive · Link only · 2026-11-13
- [Chinese-medical-dialogue-data（Toyhom）](https://mdexa.com/datasets/chinese-medical-dialogue-data/) — Permissive · Link only · unknown-provenance · 2026-11-12
- [CMB (Chinese Medical Benchmark)](https://mdexa.com/datasets/cmb/) — Permissive · Link only · exam-derived · 2026-11-12
- [CMtMedQA](https://mdexa.com/datasets/cmtmedqa/) — Permissive · Link only · real-patient-text · 2026-11-12
- [huatuo_encyclopedia_qa](https://mdexa.com/datasets/huatuo-encyclopedia-qa/) — Permissive · Link only · scraped · 2026-11-12
- [Huatuo-26M](https://mdexa.com/datasets/huatuo-26m/) — Permissive · Link only · scraped, real-patient-text · 2026-11-12
- [Huatuo26M-Lite](https://mdexa.com/datasets/huatuo26m-lite/) — Permissive · Link only · scraped, model-generated, derived · 2026-11-12
- [HuatuoGPT-sft-data-v1](https://mdexa.com/datasets/huatuogpt-sft-data-v1/) — Permissive · Link only · unknown-provenance · 2026-11-12
- [medical-o1-reasoning-SFT（中文子集）](https://mdexa.com/datasets/medical-o1-reasoning-sft/) — Permissive · Link only · model-generated · 2026-11-12
- [ATC/DDD Index](https://mdexa.com/datasets/atc-ddd/) — Restricted · Link only · 2026-11-14
- [DDInter](https://mdexa.com/datasets/ddinter/) — Restricted · Link only · 2026-11-14
- [DiagnosisArena](https://mdexa.com/datasets/diagnosisarena/) — Restricted · Link only · real-patient-text · 2026-11-14
- [ICD-11](https://mdexa.com/datasets/icd-11/) — Restricted · Link only · 2026-11-14
- [International Clinical Trials Registry Platform (ICTRP)](https://mdexa.com/datasets/who-ictrp/) — Restricted · Link only · 2026-11-14
- [jablonkagroup/chempile-lift](https://mdexa.com/datasets/chempile-lift/) — Restricted · Link only · 2026-11-14
- [KEGG: Kyoto Encyclopedia of Genes and Genomes](https://mdexa.com/datasets/kegg/) — Restricted · Link only · 2026-11-14
- [LOINC](https://mdexa.com/datasets/loinc/) — Restricted · Link only · 2026-11-14
- [PMC-Patients-ReCDS](https://mdexa.com/datasets/pmc-patients-recds/) — Restricted · Link only · derived, real-patient-text · 2026-11-14
- [SNOMED CT](https://mdexa.com/datasets/snomed-ct/) — Restricted · Link only · 2026-11-14
- [THEMol: Torsion, Hessian, Energy of Molecules](https://mdexa.com/datasets/themol/) — Restricted · Link only · 2026-11-14
- [ClinPGx/PharmGKB](https://mdexa.com/datasets/pharmgkb/) — Restricted · Link only · 2026-11-13
- [DrugBank](https://mdexa.com/datasets/drugbank/) — Restricted · Link only · 2026-11-13
- [Human Phenotype Ontology](https://mdexa.com/datasets/hpo/) — Restricted · Link only · 2026-11-13
- [MedDRA](https://mdexa.com/datasets/meddra/) — Restricted · Link only · 2026-11-13
- [openFDA](https://mdexa.com/datasets/openfda/) — Restricted · Link only · 2026-11-13
- [RxNorm](https://mdexa.com/datasets/rxnorm/) — Restricted · Link only · derived · 2026-11-13
- [UMLS Metathesaurus](https://mdexa.com/datasets/umls/) — Restricted · Link only · 2026-11-13
- [国家标准全文公开系统（含卫生健康类国家标准）](https://mdexa.com/datasets/openstd-national-standards/) — Restricted · Link only · 2026-11-12
- [中医药多维知识图谱（TCM-MKG）](https://mdexa.com/datasets/tcm-mkg/) — Restricted · Link only · derived · 2026-11-12
- [BianQueCorpus（扁鹊健康大数据）](https://mdexa.com/datasets/bianque-corpus/) — Restricted · Link only · derived, scraped, real-patient-text · 2026-11-12
- [cMedQA2](https://mdexa.com/datasets/cmedqa2/) — Restricted · Link only · 2026-11-12
- [CMExam](https://mdexa.com/datasets/cmexam/) — Restricted · Link only · exam-derived · 2026-11-12
- [DISC-Med-SFT](https://mdexa.com/datasets/disc-med-sft/) — Restricted · Link only · derived, scraped, real-patient-text, model-generated · 2026-11-12
- [Huatuo-Llama-Med-Chinese 知识库问答与文献数据](https://mdexa.com/datasets/huatuo-llama-med-chinese-data/) — Restricted · Link only · model-generated · 2026-11-12
- [PromptCBLUE](https://mdexa.com/datasets/promptcblue/) — Restricted · Link only · derived · 2026-11-12
- [QASystemOnMedicalKG（医疗知识图谱）](https://mdexa.com/datasets/qasystem-medical-kg/) — Restricted · Link only · scraped · 2026-11-12
- [tcm-acupuncture-classics（中医针灸经络古籍整理）](https://mdexa.com/datasets/tcm-acupuncture-classics/) — Restricted · Link only · 2026-11-12
- [TCMQA（TechTCM）](https://mdexa.com/datasets/tcmqa/) — Restricted · Link only · exam-derived · 2026-11-12
- [Therapeutics Data Commons](https://mdexa.com/datasets/tdc/) — Unstated · Pending · 2026-11-14
- [ClinicalTrials.gov](https://mdexa.com/datasets/clinicaltrials-gov/) — Unstated · Pending · 2026-11-13
- [DrugCentral](https://mdexa.com/datasets/drugcentral/) — Unstated · Pending · real-patient-text · 2026-11-14
- [GEO](https://mdexa.com/datasets/geo/) — Unstated · Pending · 2026-11-14
- [GTEx](https://mdexa.com/datasets/gtex/) — Unstated · Pending · real-patient-text · 2026-11-14
- [PubMed](https://mdexa.com/datasets/pubmed-medline/) — Unstated · Pending · derived · 2026-11-13
- [殆知阁古代文献 txt 大全集（含医藏）](https://mdexa.com/datasets/daizhige-classics/) — Unstated · Pending · 2026-11-12
- [CBLUE](https://mdexa.com/datasets/cblue/) — Unstated · Pending · 2026-11-12
- [CMKG（中文多模态医学知识图谱）](https://mdexa.com/datasets/cmkg/) — Unstated · Pending · scraped · 2026-11-12
- [IMCS-21](https://mdexa.com/datasets/imcs-21/) — Unstated · Pending · real-patient-text · 2026-11-12
- [MedDG](https://mdexa.com/datasets/meddg/) — Unstated · Pending · scraped, real-patient-text · 2026-11-12
- [MedQA（含大陆中文题，MCMLE）](https://mdexa.com/datasets/medqa/) — Unstated · Pending · exam-derived · 2026-11-12
- [MLEC-QA](https://mdexa.com/datasets/mlec-qa/) — Unstated · Pending · exam-derived · 2026-11-12
- [TCMBench（TCM-ED）](https://mdexa.com/datasets/tcmbench/) — Unstated · Pending · exam-derived · 2026-11-12
- [ESL-bench (Event-driven Synthetic Longitudinal Benchmark)](https://mdexa.com/datasets/esl-bench/) — Conflict · Pending · 2026-11-14
- [MedChatZH](https://mdexa.com/datasets/medchatzh/) — Conflict · Pending · 2026-11-14
- [ChatMed_Consult_Dataset](https://mdexa.com/datasets/chatmed-consult-dataset/) — Conflict · Pending · scraped, model-generated · 2026-11-12
- [ShenNong_TCM_Dataset（ChatMed_TCM_Dataset）](https://mdexa.com/datasets/shennong-tcm-dataset/) — Conflict · Pending · model-generated · 2026-11-12
- [国家基本医疗保险、生育保险和工伤保险药品目录（2025年）](https://mdexa.com/datasets/nrdl-2025/) — Unverifiable · Pending · 2026-11-12
- [Collection of 791 Traditional Chinese Medicine books（Figshare）](https://mdexa.com/datasets/figshare-tcm-791-books/) — Unverifiable · Pending · derived · 2026-11-12
- [DiaKG（糖尿病知识图谱标注数据）](https://mdexa.com/datasets/diakg/) — Unverifiable · Pending · 2026-11-12
- [HERB（中药高通量实验与文献数据库）](https://mdexa.com/datasets/herb/) — Unverifiable · Pending · 2026-11-12
- [MedBench（上海人工智能实验室）](https://mdexa.com/datasets/medbench/) — Unverifiable · Pending · 2026-11-12
- [MedDialog-CN](https://mdexa.com/datasets/meddialog-cn/) — Unverifiable · Pending · scraped, real-patient-text · 2026-11-12
- [TCM-3CEval](https://mdexa.com/datasets/tcm-3ceval/) — Unverifiable · Pending · exam-derived · 2026-11-12
- [TCM-NER（中医药说明书实体识别）](https://mdexa.com/datasets/tcm-ner/) — Unverifiable · Pending · 2026-11-12
- [TCM-SD（辨证分型数据集）](https://mdexa.com/datasets/tcm-sd/) — Unverifiable · Pending · real-patient-text · 2026-11-12
- [TCMEval-SDT（辨证思维评测）](https://mdexa.com/datasets/tcmeval-sdt/) — Unverifiable · Pending · real-patient-text · 2026-11-12